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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805863.1_cds_XP_016494111.1_8551
CDS Infomation

[gene=LOC107813365] [db_xref=GeneID:107813365] [protein=transcription factor HBP-1b(c38)-like] [protein_id=XP_016494111.1] [location=complement(join(19886..20035,21906..22148,22850..23124,24174..24249,24380..24457,24589..24648,24866..24934,25158..25280,25533..25612,26011..26117,26230..26372))] [gbkey=CDS]
Sequence

ATGGGGCTTGAAAGTGATAATCAGATTTCTTTTGGCAGTGATCATCAGCAACATTTATTA
TTCCATAATTCTCAGCATCAGATTTCTTTTGGAATGTTACAGCAGTCATCTTCTACATCA
TCTGTCATTCCAGGAAACTTTATAAGCAAAGACATTAATACTGGTGGAGCTAATTATGAT
TTAGGTGAACTAGATCAAGCCTTTTTCCTTTACCTTGATGGTCAAGATCCTTCTTCAAAC
CATCTAAGAGAAAATAATTCTGAGATGAGACCACCGACTCTGAACATTTTCCCATCACAG
CCCATGCATGTTGAGCCATCATCAACTAAGGCAAATACTGGATTGGTTTCTAGTGGTTCC
CAGAAATCATCTCAGCCGTCTATAATGGAGTTAACGAATTCTAAAAATGATGTTCTTTCT
GCAGCTTCTGGACCTGAACCAAAAGTTGCTAAGCGAGAATGGAACAGGAAGGGTCTAAAT
TCAGGTTCAGAGAAAGATGCACCTAAAATACCAGATCATAAGACATTGAGGAGACTTGCT
CAGAATAGGGAAGCAGCTAGGAAAAGCAGACTTAGGAAAAAGGCTTATATTCAGCAGCTA
GAGTCAAGTAGAGTAAGGCTTGCCCAGTTAGAACAAGAACTACAAAGGGCCAGATCTCAA
GGATTCCATTTTGGGGGTAATGCTCTTTTAGGAGGAGACCAAGCCCTACCTGTTAATAGG
GGCAGCATGAGCTCAGATGCTGCGGTTTTTGATATGGAGTACGCAAGGTGGGTGGAGGAA
CATCATCGTCTCATTTGCGAGCTTAGAAGTGCAGTTGTGGAGGAACATTTGCCGGAGAAC
GAACTTCGGATGTATGTCGACAATTGTTTGACACATTACGACCAGATTATGAACCTCAAG
AGCATGCTTGCAAAATCCGACGTCTTTCATCTTGTTTCCGGCATGTGGAAAACTCCGGCC
GAGCGCTGTTCTATTTGGATGGGAGATTTCCGGCCATCCGAGCTCATCAAAATTATCCTG
AGTCAGATTGAGCCATTAACAGAAGAACAATTTGTGGGGATTTGTGGGTTGCAACAATCA
ACGCAAGAAGCTGAGAGTGCACTTTCACAAGGGCTGGAAGCTCTGAATCAGTCTCTTTCA
GACACATTTGTCTCTGATGCATTGGCTAATTGCCCTCAAAACATGGCTAACTACATGGGC
CAAATGGCCCTTGCAATCAACAAACTTTCCACTCTTGAAGTTTTTTTTAGACAGGCTGAG
AATTTGAGGCACCAAACAATTCATCGGCTGCATCAAATTTTGACAAGTCGTCAAGCGGCG
AGGTGCTTTTTGGCAATTGCTGAATATTTCCATAGGCTTCGAGCTCTTAGCTCTCTTTGG
GTGGCGCGACCTCGTCAAGAATAA

Peptide Sequence

PEP ID

XP_016494111.1
PEP Infomation

PREDICTED: transcription factor HBP-1b(c38)-like [Nicotiana tabacum]
Sequence

MGLESDNQISFGSDHQQHLLFHNSQHQISFGMLQQSSSTSSVIPGNFISKDINTGGANYD
LGELDQAFFLYLDGQDPSSNHLRENNSEMRPPTLNIFPSQPMHVEPSSTKANTGLVSSGS
QKSSQPSIMELTNSKNDVLSAASGPEPKVAKREWNRKGLNSGSEKDAPKIPDHKTLRRLA
QNREAARKSRLRKKAYIQQLESSRVRLAQLEQELQRARSQGFHFGGNALLGGDQALPVNR
GSMSSDAAVFDMEYARWVEEHHRLICELRSAVVEEHLPENELRMYVDNCLTHYDQIMNLK
SMLAKSDVFHLVSGMWKTPAERCSIWMGDFRPSELIKIILSQIEPLTEEQFVGICGLQQS
TQEAESALSQGLEALNQSLSDTFVSDALANCPQNMANYMGQMALAINKLSTLEVFFRQAE
NLRHQTIHRLHQILTSRQAARCFLAIAEYFHRLRALSSLWVARPRQE

Transcript Sequence

Gene sequence data has not been registered.